BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F01SP1|AL425147
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1582 1799 0.0
>3x_Contig1582
Length = 14087
Score = 1799 bits (893), Expect = 0.0
Identities = 935/961 (97%), Gaps = 2/961 (0%)
Strand = Plus / Plus
Query: 1 atatcgagaaagtcagaaat-gatacctttsacgcagatatagaaatggatgacagccat 59
||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||| ||
Sbjct: 47 atatcgagaaagttagaaatagatacctttgacgcagatatagaaatggatgacagctat 106
Query: 60 gttgattctkactcgcaaggmaatcttgatatcaatgctgatccaggcgctgcagaacac 119
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gttgattctgactcgcaaggaaatcttgatatcaatgctgatccaggcgctgcagaacac 166
Query: 120 gatcaattggttgactacgaaactgaaccatcggaggcaccttcaggcattgccacccca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gatcaattggttgactacgaaactgaaccatcggaggcaccttcaggcattgccacccca 226
Query: 180 gtgccaagaggtgaagaggattcaaactgttccatgatgaattctcatmccgctttcagg 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 227 gtgccaagaggtgaagaggattcaaactgttccatgatgaattctcataccgctttcagg 286
Query: 240 gatattgatgtgttttcgtacaattatttctttggaagaacagcagctgaacgtgcgctt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gatattgatgtgttttcgtacaattatttctttggaagaacagcagctgaacgtgcgctt 346
Query: 300 gatcccagatactcaaamatacatcatttgagacacgagattggtttattcttacacaag 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gatcccagatactcaaaaatacatcatttgagacacgagattggtttattcttacacaag 406
Query: 360 ctcttcaaatttttaaatcaaaattatgagaattcaacatccgtattccagactttatta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ctcttcaaatttttaaatcaaaattatgagaattcaacatccgtattccagactttatta 466
Query: 420 catggtttgaaggtctggtttactgatgttgggcaagamactatattcattgatgatcca 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 467 catggtttgaaggtctggtttactgatgttgggcaagaaactatattcattgatgatcca 526
Query: 480 aaggcgtcgatatctgtggaattcctagaaaacatacaagacatagcacactgggaggma 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 527 aaggcgtcgatatctgtggaattcctagaaaacatacaagacatagcacactgggaggaa 586
Query: 540 ccgttccttccatttacmagamcgtatctcgcagctgactgtcaggmacttcaccagtct 599
||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 587 ccgttccttccatttacaagaacgtatctcgcagctgactgtcaggaacttcaccagtct 646
Query: 600 agacttaccttatmttcmmctaataggmmaccatcgamactggaattgamacttttgamt 659
||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||| |
Sbjct: 647 agacttaccttatattcaactaataggaaaccatcgaaactggaattgaaacttttgaat 706
Query: 660 gatgtcatttctttatctctatcggtgtatccaaacattcacagacccgcacagcaatgc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gatgtcatttctttatctctatcggtgtatccaaacattcacagacccgcacagcaatgc 766
Query: 720 atgattcatgttatgaaacagttaattggttcatattcgataatcgtaagahaggttttc 779
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 767 atgattcatgttatgaaacagttaattggttcatattcgataatcgtaagaaaggttttc 826
Query: 780 aaagcattcgawgctgcacttgacagtactgatgccgaagcttctaagaaattgggaggt 839
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 827 aaagcattcgaagctgcacttgacagtactgatgccgaagcttctaagaaatt-ggaggt 885
Query: 840 tttgatccaggtgttatccatgaagaaaatacagagaaagatgatgtcagattatawaah 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 886 tttgatccaggtgttatccatgaagaaaatacagagaaagatgatgtcagattataaaaa 945
Query: 900 tcttgagaaaatgctcactcttttattgcgtgcatctcgtctcgactcttacttcttagt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 tcttgagaaaatgctcactcttttattgcgtgcatctcgtctcgactcttacttcttagt 1005
Query: 960 c 960
|
Sbjct: 1006 c 1006
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6160
Number of Sequences: 1807
Number of extensions: 6160
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)